Photo of Kourosh Zarringhalam,  PhD

Kourosh Zarringhalam, PhD

University Of Massachusetts - Boston

University Of Massachusetts - Boston
Phone: (617) 287-7486


kourosh.zarringhalam@umb.edu

Kourosh Zarringhalam, PhD

University Of Massachusetts - Boston

EDUCATIONAL TITLES

  • Assistant Professor, College of Science and Math, University Of Massachusetts - Boston

DF/HCC PROGRAM AFFILIATION

Research Abstract

I am interested in application of mathematics and computational methods for modeling biological processes. Current projects of interest include, post-transcriptional regulation of tumor suppressor genes via competing endogenous RNAs (ceRNAs), machine learning methods for biomarker discovery, and causal reasoning on biological networks.

 

Publications

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  • Zarringhalam K, Enayetallah A, Reddy P, Ziemek D. Robust clinical outcome prediction based on Bayesian analysis of transcriptional profiles and prior causal networks. Bioinformatics 2014; 30:i69-i77. PubMed
  • Zarringhalam K, Enayetallah A, Gutteridge A, Sidders B, Ziemek D. Molecular causes of transcriptional response: a Bayesian prior knowledge approach. Bioinformatics 2013; 29:3167-73. PubMed
  • Zarringhalam K, Ka M, Kook YH, Terranova JI, Suh Y, King OD, Um M. An open system for automatic home-cage behavioral analysis and its application to male and female mouse models of Huntington's disease. Behav Brain Res 2012; 229:216-25. PubMed
  • Zarringhalam K, Meyer MM, Dotu I, Chuang JH, Clote P. Integrating chemical footprinting data into RNA secondary structure prediction. PLoS ONE 2012; 7:e45160. PubMed
  • Zhang L, Díaz-Díaz N, Zarringhalam K, Hermansson M, Somerharju P, Chuang J. Dynamics of the ethanolamine glycerophospholipid remodeling network. PLoS ONE 2012; 7:e50858. PubMed
  • Zarringhalam K, Zhang L, Kiebish MA, Yang K, Han X, Gross RW, Chuang J. Statistical analysis of the processes controlling choline and ethanolamine glycerophospholipid molecular species composition. PLoS ONE 2012; 7:e37293. PubMed