DF/HCC Program Affiliation

Research Abstract

Publications

• Kohane IS, Mandl KD, Taylor PL, Holm IA, Nigrin DJ, Kunkel LM.Medicine. Reestablishing the researcher-patient compact.Science 2007 May 11;316(5826):836-7.
  17495156
• Patel AA, Gupta D, Seligson D, Hattab EM, Balis UJ, Ulbright TM, Kohane IS, Berman JJ, Gilbertson JR, Dry S, Schirripa O, Yu H, Becich MJ, Parwani AV,.Availability and quality of paraffin blocks identified in pathology archives: a multi-institutional stud
  17386082
• Inaoka H, Fukuoka Y, Kohane IS.Evidence of spatially bound gene regulation in Mus musculus: decreased gene expression proximal to microRNA genomic location.Proc Natl Acad Sci U S A 2007 Mar 20;104(12):5020-5.
  17360362
• Allocco DJ, Song Q, Gibbons GH, Ramoni MF, Kohane IS.Geography and genography: prediction of continental origin using randomly selected single nucleotide polymorphisms.BMC Genomics 2007;8:68.
  17349058
• Simons W, Halamka J, Kohane IS, Nigrin D, Finstein N, Mandl KD.Integration of the Personally Controlled Electronic Medical Record into Regional Inter-regional Data Exchanges: A National Demonstration.AMIA Annu Symp Proc 2006:1099.
  17238718
• Hackett KL, Kohane IS, Chueh HC, Murphy SN.Mapping tool for maintaining vocabulary relationships.AMIA Annu Symp Proc 2006:939.
  17238558
• Murphy SN, Mendis ME, Berkowicz DA, Kohane IS, Chueh HC.Integration of Clinical and Genetic Data in the i2b2 Architecture.AMIA Annu Symp Proc 2006:1040.
  17238659
• Brownstein JS, Cassa CA, Kohane IS, Mandl KD.An unsupervised classification method for inferring original case locations from low-resolution disease maps.Int J Health Geogr 2006;5:56.
  17156451
• Liu F, Park PJ, Lai W, Maher E, Chakravarti A, Durso L, Jiang X, Yu Y, Brosius A, Thomas M, Chin L, Brennan C, DePinho RA, Kohane I, Carroll RS, Black PM, Johnson MD.A genome-wide screen reveals functional gene clusters in the cancer genome and identifies
  17090523
• Frank NY, Kho AT, Schatton T, Murphy GF, Molloy MJ, Zhan Q, Ramoni MF, Frank MH, Kohane IS, Gussoni E.Regulation of myogenic progenitor proliferation in human fetal skeletal muscle by BMP4 and its antagonist Gremlin.J Cell Biol 2006 Oct 9;175(1):99-110.
  17015616
• Carter SL, Eklund AC, Kohane IS, Harris LN, Szallasi Z.A signature of chromosomal instability inferred from gene expression profiles predicts clinical outcome in multiple human cancers.Nat Genet 2006 Sep;38(9):1043-8.
  16921376
• Kohane IS, Masys DR, Altman RB.The incidentalome: a threat to genomic medicine.JAMA 2006 Jul 12;296(2):212-5.
  16835427
• Liu H, Kho AT, Kohane IS, Sun Y.Predicting Survival within the Lung Cancer Histopathological Hierarchy Using a Multi-Scale Genomic Model of Development.PLoS Med 2006 Jul 4;3(7):e232.
  16800721
• Turchin A, Pendergrass ML, Kohane IS.DITTO - a tool for identification of patient cohorts from the text of physician notes in the electronic medical record.AMIA Annu Symp Proc 2005:744-8.
  16779139
• Brownstein JS, Cassa CA, Kohane IS, Mandl KD.Reverse geocoding: concerns about patient confidentiality in the display of geospatial health data.AMIA Annu Symp Proc 2005:905.
  16779192
• Gazda HT, Kho AT, Sanoudou D, Zaucha JM, Kohane IS, Sieff CA, Beggs AH.Defective Ribosomal Protein Gene Expression Alters Transcription, Translation, Apoptosis And Oncogenic Pathways In Diamond-Blackfan Anemia.Stem Cells 2006 Jun 1.
  16741228
• Sebastiani P, Mandl KD, Szolovits P, Kohane IS, Ramoni MF.A Bayesian dynamic model for influenza surveillance.Stat Med 2006 Jun 15;25(11):1823-5.
  16680805
• Adida B, Kohane IS.GenePING: secure, scalable management of personal genomic data.BMC Genomics 2006;7:93.
  16638151
• Kho AT, Kang PB, Kohane IS, Kunkel LM.Transcriptome-scale similarities between mouse and human skeletal muscles with normal and myopathic phenotypes.BMC Musculoskelet Disord 2006 Mar 7;7(1):23.
  16522209
• Inaoka H, Fukuoka Y, Kohane IS.Lower expression of genes near microRNA in C. elegans germline.BMC Bioinformatics 2006;7:112.
  16519803
• Marinescu VD, Kohane IS, Kim TK, Harmin DA, Greenberg ME, Riva A.START: an automated tool for serial analysis of chromatin occupancy data.Bioinformatics 2006 Apr 15;22(8):999-1001.
  16500934
• Butte AJ, Kohane IS.Creation and implications of a phenome-genome network.Nat Biotechnol 2006 Jan;24(1):55-62.
  16404398