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Carla F. Kim, PhD

Publications

  • Mingueneau M, Kreslavsky T, Gray D, Heng T, Cruse R, Ericson J, Bendall S, Spitzer M, Nolan G, Kobayashi K, von Boehmer H, Mathis D, Benoist C, , Best AJ, Knell J, Goldrath A, Jojic V, Koller D, Shay T, Regev A, Cohen N, Brennan P, Brenner M, Kim F, Rao TN, Wagers A, Heng T, Ericson J, Rothamel K, Ortiz-Lopez A, Mathis D, Benoist C, Bezman NA, Sun JC, Min-Oo G, Kim CC, Lanier LL, Miller J, Brown B, Merad M, Gautier EL, Jakubzick C, Randolph GJ, Monach P, Blair DA, Dustin ML, Shinton SA, Hardy RR, Laidlaw D, Collins J, Gazit R, Rossi DJ, Malhotra N, Sylvia K, Kang J, Kreslavsky T, Fletcher A, Elpek K, Bellemare-Pelletier A, Malhotra D, Turley S.The transcriptional landscape of αβ T cell differentiation.Nat Immunol. 2013 May 5.
    23644507
  • Jojic V, Shay T, Sylvia K, Zuk O, Sun X, Kang J, Regev A, Koller D, , Best AJ, Knell J, Goldrath A, Jojic V, Koller D, Shay T, Regev A, Cohen N, Brennan P, Brenner M, Kim F, Rao TN, Wagers A, Heng T, Ericson J, Rothamel K, Ortiz-Lopez A, Mathis D, Benoist C, Bezman NA, Sun JC, Min-Oo G, Kim CC, Lanier LL, Miller J, Brown B, Merad M, Gautier EL, Jakubzick C, Randolph GJ, Monach P, Blair DA, Dustin ML, Shinton SA, Hardy RR, Laidlaw D, Collins J, Gazit R, Rossi DJ, Malhotra N, Sylvia K, Kang J, Kreslavsky T, Fletcher A, Elpek K, Bellemare-Pelletier A, Malhotra D, Turley S.Identification of transcriptional regulators in the mouse immune system.Nat Immunol. 2013 Apr 28.
    23624555
  • Lee JH, Kim J, Gludish D, Roach RR, Saunders AH, Barrios J, Woo AJ, Chen H, Conner DA, Fujiwara Y, Stripp BR, Kim CF.Surfactant protein-C chromatin-bound green fluorescence protein reporter mice reveal heterogeneity of surfactant protein C-expressing lung cells.Am J Respir Cell Mol Biol. 2013 Mar;48(3):288-98.
    23204392
  • Castaño Z, Fillmore CM, Kim CF, McAllister SS.The bed and the bugs: interactions between the tumor microenvironment and cancer stem cells.Semin Cancer Biol. 2012 Oct;22(5-6):462-70.
    22548722
  • Lau AN, Goodwin M, Kim CF, Weiss DJ.Stem Cells and Regenerative Medicine in Lung Biology and Diseases.Mol Ther. 2012 Mar 6.
    22395528
  • Tropea KA, Leder E, Aslam M, Lau AN, Raiser DM, Lee JH, Balasubramaniam V, Fredenburgh LE, Mitsialis SA, Kourembanas S, Kim CF.Bronchioalveolar stem cells increase after mesenchymal stromal cell treatment in a mouse model of bronchopulmonary dysplasia.Am J Physiol Lung Cell Mol Physiol. 2012 Feb 10.
    22328358
  • Yu M, Mazor T, Huang H, Huang HT, Kathrein KL, Woo AJ, Chouinard CR, Labadorf A, Akie TE, Moran TB, Xie H, Zacharek S, Taniuchi I, Roeder RG, Kim CF, Zon LI, Fraenkel E, Cantor AB.Direct recruitment of polycomb repressive complex 1 to chromatin by core binding transcription factors.Mol Cell. 2012 Feb 10;45(3):330-43.
    22325351
  • Zacharek SJ, Fillmore CM, Lau AN, Gludish DW, Chou A, Ho JW, Zamponi R, Gazit R, Bock C, Jäger N, Smith ZD, Kim TM, Saunders AH, Wong J, Lee JH, Roach RR, Rossi DJ, Meissner A, Gimelbrant AA, Park PJ, Kim CF.Lung stem cell self-renewal relies on BMI1-dependent control of expression at imprinted loci.Cell Stem Cell. 2011 Sep 2;9(3):272-81.
    21885022
  • Park KS, Liang MC, Raiser DM, Zamponi R, Roach RR, Curtis SJ, Walton Z, Schaffer BE, Roake CM, Zmoos AF, Kriegel C, Wong KK, Sage J, Kim CF.Characterization of the cell of origin for small cell lung cancer.Cell Cycle. 2011 Aug 15;10(16):2806-15.
    21822053
  • Curtis SJ, Sinkevicius KW, Li D, Lau AN, Roach RR, Zamponi R, Woolfenden AE, Kirsch DG, Wong KK, Kim CF.Primary tumor genotype is an important determinant in identification of lung cancer propagating cells.Cell Stem Cell. 2010 Jul 2;7(1):127-33.
    20621056
  • Carretero J, Shimamura T, Rikova K, Jackson AL, Wilkerson MD, Borgman CL, Buttarazzi MS, Sanofsky BA, McNamara KL, Brandstetter KA, Walton ZE, Gu TL, Silva JC, Crosby K, Shapiro GI, Maira SM, Ji H, Castrillon DH, Kim CF, García-Echeverría C, Bardeesy N, Sharpless NE, Hayes ND, Kim WY, Engelman JA, Wong KK.Integrative genomic and proteomic analyses identify targets for Lkb1-deficient metastatic lung tumors.Cancer Cell. 2010 Jun 15;17(6):547-59.
    20541700
  • Kirsch DG, Santiago PM, di Tomaso E, Sullivan JM, Hou WS, Dayton T, Jeffords LB, Sodha P, Mercer KL, Cohen R, Takeuchi O, Korsmeyer SJ, Bronson RT, Kim CF, Haigis KM, Jain RK, Jacks T.p53 controls radiation-induced gastrointestinal syndrome in mice independent of apoptosis.Science. 2010 Jan 29;327(5965):593-6.
    20019247
  • Alexander CM, Puchalski J, Klos KS, Badders N, Ailles L, Kim CF, Dirks P, Smalley MJ.Separating stem cells by flow cytometry: reducing variability for solid tissues.Cell Stem Cell. 2009 Dec 4;5(6):579-83.
    19951686
  • Raiser DM,Kim CF.Commentary: Sca-1 and Cells of the Lung: A matter of Different Sorts.Stem Cells. 2009 Mar;27(3):606-11.
    19259938
  • Dovey JS,Zacharek SJ,Kim CF,Lees JA.Bmi1 is critical for lung tumorigenesis and bronchioalveolar stem cell expansion.Proc Natl Acad Sci U S A. 2008 Aug 19;105(33):11857-62.
    18697930
  • Kim CF,Dirks PB.Cancer and stem cell biology: how tightly intertwined?.Cell Stem Cell. 2008 Aug 7;3(2):147-50.
    18682238
  • Nolen-Walston RD, Kim CF, Mazan MR, Ingenito EP, Gruntman AM, Tsai L, Boston RC, Woolfenden AE, Jacks T, Hoffman AM.Cellular kinetics and modeling of bronchioalveolar stem cell response during lung regeneration.Am J Physiol Lung Cell Mol Physiol. 2008 Jun;294(6):L1158-65.
    18375744
  • Yang Y,Iwanaga K,Raso MG,Wislez M,Hanna AE,Wieder ED,Molldrem JJ,Wistuba II,Powis G,Demayo FJ,Kim CF,Kurie JM.Phosphatidylinositol 3-kinase mediates bronchioalveolar stem cell expansion in mouse models of oncogenic K-ras-induced lung cancer.PLoS ONE. 2008;3(5):e2220.
    18493606
  • Bae JH, Lee SJ, Kim CJ, Hur SY, Park YG, Lee WC, Kim YT, Ng TL, Bock HL, Park JS.Human Papillomavirus (HPV) Type Distribution in Korean Women: A Meta-Analysis.J Microbiol Biotechnol. 2008 Apr;18(4):788-94.
    18467878
  • Kim CB.MAPK-ing out the pathways in lung stem cell regulation.Cell Stem Cell. 2007 Jun 7;1(1):11-3.
    18371326
  • Perera SA, Maser RS, Xia H, McNamara K, Protopopov A, Chen L, Hezel AF, Kim CF, Bronson RT, Castrillon DH, Chin L, Bardeesy N, Depinho RA, Wong KK.Telomere dysfunction promotes genome instability and metastatic potential in a K-ras p53 mouse model of lung cancer.Carcinogenesis. 2008 Apr;29(4):747-53.
    18283039
  • Kim CF.Paving the road for lung stem cell biology: bronchioalveolar stem cells and other putative distal lung stem cells.Am J Physiol Lung Cell Mol Physiol. 2007 Nov;293(5):L1092-8. Review.
    17693488
  • Sicinski P, Zacharek S, Kim C.Duality of p27Kip1 function in tumorigenesis.Genes Dev. 2007 Jul 15;21(14):1703-6. Review.
    17639075
  • Kim CF, Jackson EL, Kirsch DG, Grimm J, Shaw AT, Lane K, Kissil J, Olive KP, Sweet-Cordero A, Weissleder R, Jacks T.Mouse models of human non-small-cell lung cancer: raising the bar.Cold Spring Harb Symp Quant Biol. 2005;70:241-50. Review.
    16869760
  • Grimm J, Kirsch DG, Windsor SD, Kim CF, Santiago PM, Ntziachristos V, Jacks T, Weissleder R.Use of gene expression profiling to direct in vivo molecular imaging of lung cancer.Proc Natl Acad Sci U S A. 2005 Oct 4;102(40):14404-9.
    16183744
  • Kim CF, Jackson EL, Woolfenden AE, Lawrence S, Babar I, Vogel S, Crowley D, Bronson RT, Jacks T.Identification of bronchioalveolar stem cells in normal lung and lung cancer.Cell. 2005 Jun 17;121(6):823-35.
    15960971